Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 PON3-203ENST00000427422 894 ntTSL 3 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 STK19B-204ENST00000512515 211 ntBASIC23■■□□□ 1.27
PCDH11XQ9BZA7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH11XQ9BZA7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 BX276092.7-203ENST00000637198 1536 ntBASIC22.99■■□□□ 1.27
PCDH11XQ9BZA7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 AC009336.1-201ENST00000608941 1553 ntBASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 AP002414.1-201ENST00000391405 1147 ntBASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 AC116407.2-201ENST00000613639 860 ntBASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDH11XQ9BZA7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 AC100803.2-201ENST00000562459 1963 ntBASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 DDX43P3-201ENST00000441064 443 ntBASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 CEND1P1-201ENST00000451006 455 ntBASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 AC096734.2-201ENST00000562054 433 ntBASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 AL353135.1-201ENST00000606729 504 ntBASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH11XQ9BZA7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
PCDH11XQ9BZA7 PTCHD3P3-201ENST00000403073 906 ntBASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms