Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 AC005336.2-201ENST00000593183 939 ntBASIC17.05■□□□□ 0.32
NDC1Q9BTX1 BNIP3P18-201ENST00000593976 575 ntBASIC17.05■□□□□ 0.32
NDC1Q9BTX1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.05■□□□□ 0.32
NDC1Q9BTX1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 AC093010.1-201ENST00000473625 1624 ntBASIC17.04■□□□□ 0.32
NDC1Q9BTX1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 AC026396.1-201ENST00000419388 421 ntBASIC17.04■□□□□ 0.32
NDC1Q9BTX1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 AL591684.3-201ENST00000605187 298 ntBASIC17.04■□□□□ 0.32
NDC1Q9BTX1 AC114341.1-201ENST00000618070 349 ntBASIC17.04■□□□□ 0.32
NDC1Q9BTX1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NDC1Q9BTX1 AL354751.1-201ENST00000412768 1863 ntBASIC17.03■□□□□ 0.32
NDC1Q9BTX1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 MIR5100-201ENST00000579544 119 ntBASIC17.03■□□□□ 0.32
NDC1Q9BTX1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 TP73-AS1-210ENST00000637775 1455 ntBASIC17.03■□□□□ 0.32
NDC1Q9BTX1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDC1Q9BTX1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.02■□□□□ 0.32
NDC1Q9BTX1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms