Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC025580.3-201ENST00000617932 1424 ntBASIC18.47■□□□□ 0.55
CDCA3Q99618 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDCA3Q99618 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDCA3Q99618 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CDCA3Q99618 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDCA3Q99618 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDCA3Q99618 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDCA3Q99618 PHGDH-209ENST00000641074 1780 ntBASIC18.46■□□□□ 0.55
CDCA3Q99618 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.46■□□□□ 0.55
CDCA3Q99618 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDCA3Q99618 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDCA3Q99618 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDCA3Q99618 AL035633.1-201ENST00000406139 838 ntBASIC18.46■□□□□ 0.55
CDCA3Q99618 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.46■□□□□ 0.55
CDCA3Q99618 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.46■□□□□ 0.55
CDCA3Q99618 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.46■□□□□ 0.55
CDCA3Q99618 AC004449.1-201ENST00000564240 433 ntBASIC18.46■□□□□ 0.55
CDCA3Q99618 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.46■□□□□ 0.55
CDCA3Q99618 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDCA3Q99618 AL353135.1-201ENST00000606729 504 ntBASIC18.46■□□□□ 0.55
CDCA3Q99618 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CDCA3Q99618 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDCA3Q99618 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDCA3Q99618 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.46■□□□□ 0.55
CDCA3Q99618 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.46■□□□□ 0.55
CDCA3Q99618 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDCA3Q99618 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDCA3Q99618 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CDCA3Q99618 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDCA3Q99618 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CDCA3Q99618 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDCA3Q99618 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDCA3Q99618 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDCA3Q99618 IGHV3-52-201ENST00000519770 353 ntBASIC18.45■□□□□ 0.54
CDCA3Q99618 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.45■□□□□ 0.54
CDCA3Q99618 AC109462.3-201ENST00000573934 613 ntBASIC18.45■□□□□ 0.54
CDCA3Q99618 OR7E47P-204ENST00000575924 449 ntBASIC18.45■□□□□ 0.54
CDCA3Q99618 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.45■□□□□ 0.54
CDCA3Q99618 AC091812.2-201ENST00000619081 385 ntBASIC18.45■□□□□ 0.54
CDCA3Q99618 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.45■□□□□ 0.54
CDCA3Q99618 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDCA3Q99618 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CDCA3Q99618 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CDCA3Q99618 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.45■□□□□ 0.54
CDCA3Q99618 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CDCA3Q99618 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.44■□□□□ 0.54
CDCA3Q99618 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.44■□□□□ 0.54
CDCA3Q99618 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CDCA3Q99618 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CDCA3Q99618 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA3Q99618 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA3Q99618 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA3Q99618 AL139400.1-201ENST00000366220 510 ntBASIC18.44■□□□□ 0.54
CDCA3Q99618 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.44■□□□□ 0.54
CDCA3Q99618 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CDCA3Q99618 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.44■□□□□ 0.54
CDCA3Q99618 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.44■□□□□ 0.54
CDCA3Q99618 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CDCA3Q99618 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.44■□□□□ 0.54
CDCA3Q99618 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA3Q99618 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.44■□□□□ 0.54
CDCA3Q99618 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.44■□□□□ 0.54
CDCA3Q99618 AC097637.2-201ENST00000624096 1997 ntBASIC18.44■□□□□ 0.54
CDCA3Q99618 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA3Q99618 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.44■□□□□ 0.54
CDCA3Q99618 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.44■□□□□ 0.54
CDCA3Q99618 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.44■□□□□ 0.54
CDCA3Q99618 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.44■□□□□ 0.54
CDCA3Q99618 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA3Q99618 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDCA3Q99618 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CDCA3Q99618 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.43■□□□□ 0.54
CDCA3Q99618 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.43■□□□□ 0.54
CDCA3Q99618 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CDCA3Q99618 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.43■□□□□ 0.54
CDCA3Q99618 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 BCRP1-201ENST00000444246 691 ntBASIC18.43■□□□□ 0.54
CDCA3Q99618 AC025678.2-201ENST00000562061 970 ntBASIC18.43■□□□□ 0.54
CDCA3Q99618 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDCA3Q99618 AFG3L1P-217ENST00000557444 2447 ntBASIC18.43■□□□□ 0.54
CDCA3Q99618 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CDCA3Q99618 BX276092.7-203ENST00000637198 1536 ntBASIC18.43■□□□□ 0.54
CDCA3Q99618 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CDCA3Q99618 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDCA3Q99618 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA3Q99618 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.42■□□□□ 0.54
CDCA3Q99618 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA3Q99618 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDCA3Q99618 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CDCA3Q99618 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms