Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 AC009336.1-201ENST00000608941 1553 ntBASIC18.26■□□□□ 0.51
NOTCH4Q99466 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 IGHV3-65-201ENST00000523210 341 ntBASIC18.25■□□□□ 0.51
NOTCH4Q99466 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 AL078644.1-201ENST00000609881 752 ntBASIC18.25■□□□□ 0.51
NOTCH4Q99466 AL596442.2-201ENST00000610240 980 ntBASIC18.25■□□□□ 0.51
NOTCH4Q99466 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 AC010507.1-201ENST00000633895 436 ntBASIC18.25■□□□□ 0.51
NOTCH4Q99466 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 AC005829.1-201ENST00000570002 483 ntBASIC18.25■□□□□ 0.51
NOTCH4Q99466 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NOTCH4Q99466 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.25■□□□□ 0.51
NOTCH4Q99466 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH4Q99466 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NOTCH4Q99466 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH4Q99466 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.24■□□□□ 0.51
NOTCH4Q99466 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.24■□□□□ 0.51
NOTCH4Q99466 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH4Q99466 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH4Q99466 MKNK2P1-201ENST00000437526 628 ntBASIC18.24■□□□□ 0.51
NOTCH4Q99466 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.24■□□□□ 0.51
NOTCH4Q99466 AC004790.2-201ENST00000623588 572 ntBASIC18.24■□□□□ 0.51
NOTCH4Q99466 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH4Q99466 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH4Q99466 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH4Q99466 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NOTCH4Q99466 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.24■□□□□ 0.51
NOTCH4Q99466 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.24■□□□□ 0.51
NOTCH4Q99466 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 AC003669.1-201ENST00000334569 611 ntBASIC18.23■□□□□ 0.51
NOTCH4Q99466 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 MRPL20P1-201ENST00000400819 433 ntBASIC18.23■□□□□ 0.51
NOTCH4Q99466 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 RHOQP3-201ENST00000437982 621 ntBASIC18.23■□□□□ 0.51
NOTCH4Q99466 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 MIR4751-201ENST00000578027 74 ntBASIC18.23■□□□□ 0.51
NOTCH4Q99466 C20orf181-201ENST00000623918 480 ntBASIC18.23■□□□□ 0.51
NOTCH4Q99466 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NOTCH4Q99466 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH4Q99466 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms