Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MUC4Q99102 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
MUC4Q99102 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
MUC4Q99102 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
MUC4Q99102 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MUC4Q99102 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MUC4Q99102 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.05□□□□□ -0.32
MUC4Q99102 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
MUC4Q99102 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.04□□□□□ -0.32
MUC4Q99102 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.04□□□□□ -0.32
MUC4Q99102 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 AP000550.4-202ENST00000639755 178 ntBASIC13.04□□□□□ -0.32
MUC4Q99102 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.04□□□□□ -0.32
MUC4Q99102 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
MUC4Q99102 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.04□□□□□ -0.32
MUC4Q99102 YBX1P2-201ENST00000489612 999 ntBASIC13.04□□□□□ -0.32
MUC4Q99102 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 MIR3180-4-201ENST00000582223 153 ntBASIC13.04□□□□□ -0.32
MUC4Q99102 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.04□□□□□ -0.32
MUC4Q99102 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.04□□□□□ -0.32
MUC4Q99102 CROCCP2-202ENST00000412962 2773 ntBASIC13.04□□□□□ -0.32
MUC4Q99102 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MUC4Q99102 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
MUC4Q99102 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.03□□□□□ -0.32
MUC4Q99102 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
MUC4Q99102 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.03□□□□□ -0.32
MUC4Q99102 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
MUC4Q99102 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.03□□□□□ -0.32
MUC4Q99102 LINC01238-205ENST00000567549 1107 ntBASIC13.03□□□□□ -0.32
MUC4Q99102 AL138966.2-201ENST00000621997 464 ntBASIC13.03□□□□□ -0.32
MUC4Q99102 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.03□□□□□ -0.32
MUC4Q99102 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.03□□□□□ -0.32
MUC4Q99102 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.03□□□□□ -0.32
MUC4Q99102 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
MUC4Q99102 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.03□□□□□ -0.32
MUC4Q99102 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
MUC4Q99102 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MUC4Q99102 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms