Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.29■□□□□ 0.2
SNX18Q96RF0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 AL049597.2-201ENST00000565575 961 ntBASIC16.29■□□□□ 0.2
SNX18Q96RF0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.29■□□□□ 0.2
SNX18Q96RF0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AL137013.1-201ENST00000432946 1228 ntBASIC16.28■□□□□ 0.2
SNX18Q96RF0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AL512604.3-201ENST00000569583 964 ntBASIC16.28■□□□□ 0.2
SNX18Q96RF0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AL445228.2-201ENST00000605589 952 ntBASIC16.28■□□□□ 0.2
SNX18Q96RF0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX18Q96RF0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNX18Q96RF0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 AC128688.1-201ENST00000487626 519 ntBASIC16.27■□□□□ 0.2
SNX18Q96RF0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX18Q96RF0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX18Q96RF0 OR6D1P-202ENST00000641007 5290 ntBASIC16.27■□□□□ 0.19
SNX18Q96RF0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNX18Q96RF0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SNX18Q96RF0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNX18Q96RF0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.27■□□□□ 0.19
SNX18Q96RF0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNX18Q96RF0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNX18Q96RF0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms