Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AL353801.3-201ENST00000609898 542 ntBASIC13.89□□□□□ -0.19
DUX3Q96PT4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX3Q96PT4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.89□□□□□ -0.19
DUX3Q96PT4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 KRT16P4-201ENST00000453883 522 ntBASIC13.88□□□□□ -0.19
DUX3Q96PT4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 AC005336.2-201ENST00000593183 939 ntBASIC13.88□□□□□ -0.19
DUX3Q96PT4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 KRT8P10-201ENST00000450021 1447 ntBASIC13.88□□□□□ -0.19
DUX3Q96PT4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUX3Q96PT4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.88□□□□□ -0.19
DUX3Q96PT4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 AKR1C7P-201ENST00000305623 895 ntBASIC13.87□□□□□ -0.19
DUX3Q96PT4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 MTCL1P1-201ENST00000446207 792 ntBASIC13.87□□□□□ -0.19
DUX3Q96PT4 FAAHP1-202ENST00000446499 1238 ntBASIC13.87□□□□□ -0.19
DUX3Q96PT4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
DUX3Q96PT4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DUX3Q96PT4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms