Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
AP1S3Q96PC3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 ESPNP-201ENST00000270691 2015 ntBASIC13.52□□□□□ -0.24
AP1S3Q96PC3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 AD000864.1-201ENST00000624076 2295 ntBASIC13.52□□□□□ -0.24
AP1S3Q96PC3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 AL731571.1-201ENST00000617058 5428 ntBASIC13.52□□□□□ -0.24
AP1S3Q96PC3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP1S3Q96PC3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 KRT8P41-201ENST00000533985 1514 ntBASIC13.52□□□□□ -0.25
AP1S3Q96PC3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP1S3Q96PC3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 KRT8P32-201ENST00000512863 1461 ntBASIC13.51□□□□□ -0.25
AP1S3Q96PC3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PRSS44-201ENST00000515154 1146 ntBASIC13.51□□□□□ -0.25
AP1S3Q96PC3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 AC092437.1-201ENST00000624794 1048 ntBASIC13.51□□□□□ -0.25
AP1S3Q96PC3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 AC087386.2-201ENST00000623212 4637 ntBASIC13.51□□□□□ -0.25
AP1S3Q96PC3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.51□□□□□ -0.25
AP1S3Q96PC3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms