Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 IGHV3-65-201ENST00000523210 341 ntBASIC17.37■□□□□ 0.37
CFAP54Q96N23 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP54Q96N23 AC017083.2-201ENST00000608069 979 ntBASIC17.37■□□□□ 0.37
CFAP54Q96N23 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP54Q96N23 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP54Q96N23 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP54Q96N23 KRT8P50-201ENST00000562022 1438 ntBASIC17.37■□□□□ 0.37
CFAP54Q96N23 AC107890.1-201ENST00000422478 521 ntBASIC17.37■□□□□ 0.37
CFAP54Q96N23 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP54Q96N23 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 AL022326.1-202ENST00000641533 845 ntBASIC17.37■□□□□ 0.37
CFAP54Q96N23 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP54Q96N23 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP54Q96N23 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP54Q96N23 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP54Q96N23 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP54Q96N23 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP54Q96N23 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP54Q96N23 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 MIR6787-201ENST00000616675 61 ntBASIC17.36■□□□□ 0.37
CFAP54Q96N23 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP54Q96N23 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CFAP54Q96N23 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CFAP54Q96N23 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 MTMR9LP-203ENST00000426597 1545 ntBASIC17.35■□□□□ 0.37
CFAP54Q96N23 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 AC148477.5-201ENST00000625164 1645 ntBASIC17.35■□□□□ 0.37
CFAP54Q96N23 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 GPR182-203ENST00000622922 591 ntBASIC17.35■□□□□ 0.37
CFAP54Q96N23 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 AC008677.1-201ENST00000519230 1561 ntBASIC17.35■□□□□ 0.37
CFAP54Q96N23 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CFAP54Q96N23 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.35■□□□□ 0.37
CFAP54Q96N23 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 AP001059.3-201ENST00000619053 235 ntBASIC17.34■□□□□ 0.37
CFAP54Q96N23 AL390754.1-201ENST00000619088 582 ntBASIC17.34■□□□□ 0.37
CFAP54Q96N23 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 AC125807.1-201ENST00000483097 614 ntBASIC17.34■□□□□ 0.37
CFAP54Q96N23 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms