Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00479Q96M42 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00479Q96M42 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 AC026366.1-201ENST00000488803 879 ntBASIC13.65□□□□□ -0.22
LINC00479Q96M42 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 LINC00304-203ENST00000565008 1864 ntBASIC13.65□□□□□ -0.22
LINC00479Q96M42 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00479Q96M42 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00479Q96M42 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
LINC00479Q96M42 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
LINC00479Q96M42 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 AL024508.2-201ENST00000607749 1894 ntBASIC13.64□□□□□ -0.23
LINC00479Q96M42 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 B3GAT3P1-201ENST00000471720 806 ntBASIC13.64□□□□□ -0.23
LINC00479Q96M42 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 AC026271.3-201ENST00000571884 352 ntBASIC13.64□□□□□ -0.23
LINC00479Q96M42 MIR3180-5-201ENST00000583743 153 ntBASIC13.64□□□□□ -0.23
LINC00479Q96M42 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 MIR6786-201ENST00000616843 113 ntBASIC13.64□□□□□ -0.23
LINC00479Q96M42 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms