Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC74BQ96LY2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 AP000974.1-201ENST00000623909 2387 ntBASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 AC007967.2-201ENST00000432613 625 ntBASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 AC009947.1-201ENST00000444350 727 ntBASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 AC005593.1-201ENST00000624894 515 ntBASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 WIZP1-201ENST00000531444 2299 ntBASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC74BQ96LY2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 KRT18P27-201ENST00000427733 1299 ntBASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 PRYP5-201ENST00000451909 266 ntBASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 RNA5SP416-201ENST00000516838 111 ntBASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC74BQ96LY2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC74BQ96LY2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC74BQ96LY2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC74BQ96LY2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC74BQ96LY2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC74BQ96LY2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC74BQ96LY2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CCDC74BQ96LY2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC74BQ96LY2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC74BQ96LY2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC74BQ96LY2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC74BQ96LY2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC74BQ96LY2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC74BQ96LY2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC74BQ96LY2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms