Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 AL020989.1-201ENST00000422979 469 ntBASIC20.75■□□□□ 0.91
CCDC17Q96LX7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 PMS2P1-201ENST00000431037 1228 ntBASIC20.75■□□□□ 0.91
CCDC17Q96LX7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 AC106730.1-201ENST00000566722 1090 ntBASIC20.75■□□□□ 0.91
CCDC17Q96LX7 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 AC019129.2-201ENST00000609837 1235 ntBASIC20.75■□□□□ 0.91
CCDC17Q96LX7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC17Q96LX7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 MIR574-201ENST00000385209 96 ntBASIC20.74■□□□□ 0.91
CCDC17Q96LX7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 RPL13AP23-201ENST00000480739 586 ntBASIC20.74■□□□□ 0.91
CCDC17Q96LX7 IGHV3-22-201ENST00000520721 359 ntBASIC20.74■□□□□ 0.91
CCDC17Q96LX7 AC105339.3-201ENST00000560043 636 ntBASIC20.74■□□□□ 0.91
CCDC17Q96LX7 AC012640.2-201ENST00000561606 901 ntBASIC20.74■□□□□ 0.91
CCDC17Q96LX7 AL671883.3-201ENST00000603274 991 ntBASIC20.74■□□□□ 0.91
CCDC17Q96LX7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC17Q96LX7 AC132938.5-201ENST00000624980 1813 ntBASIC20.74■□□□□ 0.91
CCDC17Q96LX7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC17Q96LX7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 AC009113.1-201ENST00000570267 2443 ntBASIC20.72■□□□□ 0.91
CCDC17Q96LX7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 AC003669.1-201ENST00000334569 611 ntBASIC20.72■□□□□ 0.91
CCDC17Q96LX7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 AC145285.3-201ENST00000564603 959 ntBASIC20.72■□□□□ 0.91
CCDC17Q96LX7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 AC109462.3-201ENST00000573934 613 ntBASIC20.72■□□□□ 0.91
CCDC17Q96LX7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC17Q96LX7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms