Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.22■□□□□ 0.67
SNX27Q96L92 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SNX27Q96L92 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX27Q96L92 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX27Q96L92 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.21■□□□□ 0.67
SNX27Q96L92 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX27Q96L92 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX27Q96L92 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNX27Q96L92 COX5BP2-201ENST00000392354 334 ntBASIC19.21■□□□□ 0.67
SNX27Q96L92 MRPL3P1-201ENST00000400109 1033 ntBASIC19.21■□□□□ 0.67
SNX27Q96L92 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX27Q96L92 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SNX27Q96L92 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX27Q96L92 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX27Q96L92 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX27Q96L92 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX27Q96L92 AP005117.1-201ENST00000584346 1413 ntBASIC19.21■□□□□ 0.67
SNX27Q96L92 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX27Q96L92 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX27Q96L92 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.21■□□□□ 0.67
SNX27Q96L92 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.21■□□□□ 0.67
SNX27Q96L92 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX27Q96L92 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.21■□□□□ 0.67
SNX27Q96L92 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX27Q96L92 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX27Q96L92 AC009949.1-201ENST00000623048 1830 ntBASIC19.21■□□□□ 0.67
SNX27Q96L92 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.2■□□□□ 0.66
SNX27Q96L92 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SNX27Q96L92 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SNX27Q96L92 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.2■□□□□ 0.66
SNX27Q96L92 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.2■□□□□ 0.66
SNX27Q96L92 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SNX27Q96L92 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.2■□□□□ 0.66
SNX27Q96L92 KRT18P58-201ENST00000527480 1120 ntBASIC19.2■□□□□ 0.66
SNX27Q96L92 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.2■□□□□ 0.66
SNX27Q96L92 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX27Q96L92 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.2■□□□□ 0.66
SNX27Q96L92 MTDHP3-201ENST00000594186 672 ntBASIC19.2■□□□□ 0.66
SNX27Q96L92 AC116407.2-201ENST00000613639 860 ntBASIC19.2■□□□□ 0.66
SNX27Q96L92 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.2■□□□□ 0.66
SNX27Q96L92 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.2■□□□□ 0.66
SNX27Q96L92 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
SNX27Q96L92 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SNX27Q96L92 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX27Q96L92 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SNX27Q96L92 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX27Q96L92 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.2■□□□□ 0.66
SNX27Q96L92 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX27Q96L92 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SNX27Q96L92 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SNX27Q96L92 AC138028.4-201ENST00000564984 1845 ntBASIC19.19■□□□□ 0.66
SNX27Q96L92 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX27Q96L92 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SNX27Q96L92 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 AL035633.1-201ENST00000406139 838 ntBASIC19.19■□□□□ 0.66
SNX27Q96L92 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX27Q96L92 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SNX27Q96L92 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX27Q96L92 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX27Q96L92 AP000867.4-201ENST00000641616 219 ntBASIC19.19■□□□□ 0.66
SNX27Q96L92 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX27Q96L92 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SNX27Q96L92 KRT18P55-202ENST00000578578 1546 ntBASIC19.19■□□□□ 0.66
SNX27Q96L92 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX27Q96L92 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX27Q96L92 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX27Q96L92 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.19■□□□□ 0.66
SNX27Q96L92 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX27Q96L92 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX27Q96L92 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms