Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCPIP1Q96JH7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.8■□□□□ 0.6
VCPIP1Q96JH7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCPIP1Q96JH7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCPIP1Q96JH7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VCPIP1Q96JH7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCPIP1Q96JH7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VCPIP1Q96JH7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VCPIP1Q96JH7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VCPIP1Q96JH7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VCPIP1Q96JH7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 AC005104.2-201ENST00000427818 678 ntBASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
VCPIP1Q96JH7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 AL645608.8-201ENST00000606034 2086 ntBASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 SIRPAP1-201ENST00000448467 1770 ntBASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VCPIP1Q96JH7 PP12613-201ENST00000424958 2230 ntBASIC18.77■□□□□ 0.59
VCPIP1Q96JH7 HCG11-201ENST00000411553 5696 ntBASIC18.77■□□□□ 0.59
VCPIP1Q96JH7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VCPIP1Q96JH7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
VCPIP1Q96JH7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VCPIP1Q96JH7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCPIP1Q96JH7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.76■□□□□ 0.59
VCPIP1Q96JH7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCPIP1Q96JH7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms