Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.03■□□□□ 0.32
ITCHQ96J02 AL512604.3-201ENST00000569583 964 ntBASIC17.03■□□□□ 0.32
ITCHQ96J02 AC116407.2-201ENST00000613639 860 ntBASIC17.03■□□□□ 0.32
ITCHQ96J02 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.03■□□□□ 0.32
ITCHQ96J02 AC092865.7-201ENST00000641832 219 ntBASIC17.03■□□□□ 0.32
ITCHQ96J02 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITCHQ96J02 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITCHQ96J02 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITCHQ96J02 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITCHQ96J02 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ITCHQ96J02 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITCHQ96J02 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITCHQ96J02 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ITCHQ96J02 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ITCHQ96J02 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.02■□□□□ 0.32
ITCHQ96J02 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.02■□□□□ 0.32
ITCHQ96J02 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ITCHQ96J02 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.02■□□□□ 0.32
ITCHQ96J02 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.02■□□□□ 0.32
ITCHQ96J02 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ITCHQ96J02 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.02■□□□□ 0.32
ITCHQ96J02 AC009947.2-201ENST00000444014 672 ntBASIC17.02■□□□□ 0.32
ITCHQ96J02 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.02■□□□□ 0.32
ITCHQ96J02 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
ITCHQ96J02 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ITCHQ96J02 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.02■□□□□ 0.32
ITCHQ96J02 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.02■□□□□ 0.32
ITCHQ96J02 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ITCHQ96J02 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.02■□□□□ 0.32
ITCHQ96J02 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ITCHQ96J02 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
ITCHQ96J02 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ITCHQ96J02 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ITCHQ96J02 AC124067.4-201ENST00000519691 2379 ntBASIC17.02■□□□□ 0.31
ITCHQ96J02 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ITCHQ96J02 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
ITCHQ96J02 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ITCHQ96J02 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.02■□□□□ 0.31
ITCHQ96J02 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.02■□□□□ 0.31
ITCHQ96J02 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.02■□□□□ 0.31
ITCHQ96J02 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ITCHQ96J02 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ITCHQ96J02 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ITCHQ96J02 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.01■□□□□ 0.31
ITCHQ96J02 KRT17P2-201ENST00000300992 1314 ntBASIC17.01■□□□□ 0.31
ITCHQ96J02 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.01■□□□□ 0.31
ITCHQ96J02 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.01■□□□□ 0.31
ITCHQ96J02 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.01■□□□□ 0.31
ITCHQ96J02 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.01■□□□□ 0.31
ITCHQ96J02 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.01■□□□□ 0.31
ITCHQ96J02 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
ITCHQ96J02 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.01■□□□□ 0.31
ITCHQ96J02 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
ITCHQ96J02 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ITCHQ96J02 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.01■□□□□ 0.31
ITCHQ96J02 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ITCHQ96J02 MIR3917-201ENST00000580971 93 ntBASIC17.01■□□□□ 0.31
ITCHQ96J02 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.01■□□□□ 0.31
ITCHQ96J02 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.01■□□□□ 0.31
ITCHQ96J02 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 LINC00167-201ENST00000530583 1419 ntBASIC17.01■□□□□ 0.31
ITCHQ96J02 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.01■□□□□ 0.31
ITCHQ96J02 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
ITCHQ96J02 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.01■□□□□ 0.31
ITCHQ96J02 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITCHQ96J02 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ITCHQ96J02 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms