Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
IFT43Q96FT9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFT43Q96FT9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 AC011498.5-201ENST00000592027 486 ntBASIC18.4■□□□□ 0.54
IFT43Q96FT9 AL121672.3-201ENST00000608644 468 ntBASIC18.4■□□□□ 0.54
IFT43Q96FT9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFT43Q96FT9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.4■□□□□ 0.54
IFT43Q96FT9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
IFT43Q96FT9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
IFT43Q96FT9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.39■□□□□ 0.54
IFT43Q96FT9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 CLEC4GP1-201ENST00000596555 870 ntBASIC18.39■□□□□ 0.53
IFT43Q96FT9 AC024563.2-201ENST00000603282 481 ntBASIC18.39■□□□□ 0.53
IFT43Q96FT9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
IFT43Q96FT9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFT43Q96FT9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 BX276092.5-203ENST00000456199 560 ntBASIC18.38■□□□□ 0.53
IFT43Q96FT9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms