Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTP4Q96DX8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.19■□□□□ 0.5
RTP4Q96DX8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTP4Q96DX8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.19■□□□□ 0.5
RTP4Q96DX8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTP4Q96DX8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 BX276092.7-203ENST00000637198 1536 ntBASIC18.18■□□□□ 0.5
RTP4Q96DX8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 AC068472.1-201ENST00000474589 881 ntBASIC18.18■□□□□ 0.5
RTP4Q96DX8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTP4Q96DX8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RTP4Q96DX8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 AP001094.4-201ENST00000579008 2176 ntBASIC18.17■□□□□ 0.5
RTP4Q96DX8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 AC096633.1-201ENST00000422446 749 ntBASIC18.17■□□□□ 0.5
RTP4Q96DX8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 MTCL1P1-201ENST00000446207 792 ntBASIC18.17■□□□□ 0.5
RTP4Q96DX8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 AL390719.2-201ENST00000606993 987 ntBASIC18.17■□□□□ 0.5
RTP4Q96DX8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.17■□□□□ 0.5
RTP4Q96DX8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 AP000550.4-202ENST00000639755 178 ntBASIC18.17■□□□□ 0.5
RTP4Q96DX8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.17■□□□□ 0.5
RTP4Q96DX8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTP4Q96DX8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 SPDYE13P-201ENST00000445314 798 ntBASIC18.16■□□□□ 0.5
RTP4Q96DX8 AC112907.2-201ENST00000448639 330 ntBASIC18.16■□□□□ 0.5
RTP4Q96DX8 AL359075.1-203ENST00000462729 1002 ntBASIC18.16■□□□□ 0.5
RTP4Q96DX8 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 VENTXP5-201ENST00000523979 775 ntBASIC18.16■□□□□ 0.5
RTP4Q96DX8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms