Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS1Q92902 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.37■□□□□ 0.21
HPS1Q92902 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.37■□□□□ 0.21
HPS1Q92902 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS1Q92902 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.37■□□□□ 0.21
HPS1Q92902 MIR6786-201ENST00000616843 113 ntBASIC16.37■□□□□ 0.21
HPS1Q92902 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS1Q92902 AC131212.4-201ENST00000623606 975 ntBASIC16.37■□□□□ 0.21
HPS1Q92902 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HPS1Q92902 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS1Q92902 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 KRT18P22-201ENST00000402024 1347 ntBASIC16.37■□□□□ 0.21
HPS1Q92902 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS1Q92902 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HPS1Q92902 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS1Q92902 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HPS1Q92902 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS1Q92902 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.37■□□□□ 0.21
HPS1Q92902 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS1Q92902 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.36■□□□□ 0.21
HPS1Q92902 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.36■□□□□ 0.21
HPS1Q92902 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.36■□□□□ 0.21
HPS1Q92902 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
HPS1Q92902 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
HPS1Q92902 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.36■□□□□ 0.21
HPS1Q92902 AP001094.4-201ENST00000579008 2176 ntBASIC16.36■□□□□ 0.21
HPS1Q92902 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.36■□□□□ 0.21
HPS1Q92902 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HPS1Q92902 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.36■□□□□ 0.21
HPS1Q92902 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.36■□□□□ 0.21
HPS1Q92902 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HPS1Q92902 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.36■□□□□ 0.21
HPS1Q92902 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.36■□□□□ 0.21
HPS1Q92902 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.36■□□□□ 0.21
HPS1Q92902 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 LINC02199-201ENST00000506655 2702 ntBASIC16.36■□□□□ 0.21
HPS1Q92902 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HPS1Q92902 LINC01568-207ENST00000641790 1380 ntBASIC16.36■□□□□ 0.21
HPS1Q92902 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
HPS1Q92902 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.36■□□□□ 0.21
HPS1Q92902 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HPS1Q92902 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.36■□□□□ 0.21
HPS1Q92902 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS1Q92902 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.36■□□□□ 0.21
HPS1Q92902 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.35■□□□□ 0.21
HPS1Q92902 AL136379.1-201ENST00000623471 2642 ntBASIC16.35■□□□□ 0.21
HPS1Q92902 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS1Q92902 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HPS1Q92902 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.35■□□□□ 0.21
HPS1Q92902 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.35■□□□□ 0.21
HPS1Q92902 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS1Q92902 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.35■□□□□ 0.21
HPS1Q92902 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS1Q92902 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS1Q92902 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.35■□□□□ 0.21
HPS1Q92902 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HPS1Q92902 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.35■□□□□ 0.21
HPS1Q92902 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS1Q92902 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms