Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 AL353801.3-201ENST00000609898 542 ntBASIC18.75■□□□□ 0.59
RNF139Q8WU17 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF139Q8WU17 AP000997.3-201ENST00000623333 2250 ntBASIC18.75■□□□□ 0.59
RNF139Q8WU17 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF139Q8WU17 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 AC091607.1-201ENST00000490318 1060 ntBASIC18.74■□□□□ 0.59
RNF139Q8WU17 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF139Q8WU17 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF139Q8WU17 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 NUS1P1-201ENST00000446295 882 ntBASIC18.73■□□□□ 0.59
RNF139Q8WU17 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 AP005901.3-202ENST00000581653 237 ntBASIC18.73■□□□□ 0.59
RNF139Q8WU17 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 AC099336.1-202ENST00000602961 463 ntBASIC18.73■□□□□ 0.59
RNF139Q8WU17 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 NSUN5P1-202ENST00000421140 1535 ntBASIC18.73■□□□□ 0.59
RNF139Q8WU17 NSUN5P2-203ENST00000457352 1529 ntBASIC18.73■□□□□ 0.59
RNF139Q8WU17 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF139Q8WU17 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF139Q8WU17 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms