Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.56■■□□□ 1.04
SNED1Q8TER0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.56■■□□□ 1.04
SNED1Q8TER0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.56■■□□□ 1.04
SNED1Q8TER0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.56■■□□□ 1.04
SNED1Q8TER0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNED1Q8TER0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.56■■□□□ 1.04
SNED1Q8TER0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 MRPL20P1-201ENST00000400819 433 ntBASIC21.55■■□□□ 1.04
SNED1Q8TER0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 AC091812.2-201ENST00000619081 385 ntBASIC21.55■■□□□ 1.04
SNED1Q8TER0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
SNED1Q8TER0 AC092902.6-201ENST00000641783 218 ntBASIC21.55■■□□□ 1.04
SNED1Q8TER0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNED1Q8TER0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 FAM58CP-201ENST00000435741 640 ntBASIC21.54■■□□□ 1.04
SNED1Q8TER0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 AC011467.4-201ENST00000594891 528 ntBASIC21.54■■□□□ 1.04
SNED1Q8TER0 AL353135.1-201ENST00000606729 504 ntBASIC21.54■■□□□ 1.04
SNED1Q8TER0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNED1Q8TER0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.54■■□□□ 1.04
SNED1Q8TER0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.53■■□□□ 1.04
SNED1Q8TER0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SNED1Q8TER0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.53■■□□□ 1.04
SNED1Q8TER0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 AP002414.1-201ENST00000391405 1147 ntBASIC21.53■■□□□ 1.04
SNED1Q8TER0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.53■■□□□ 1.04
SNED1Q8TER0 STK25P1-201ENST00000585406 838 ntBASIC21.53■■□□□ 1.04
SNED1Q8TER0 AC092364.2-202ENST00000597012 1073 ntBASIC21.53■■□□□ 1.04
SNED1Q8TER0 AL096865.1-201ENST00000606796 927 ntBASIC21.53■■□□□ 1.04
SNED1Q8TER0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SNED1Q8TER0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SNED1Q8TER0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms