Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 AC132938.5-201ENST00000624980 1813 ntBASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 AC098831.1-202ENST00000438821 336 ntBASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 AL353593.2-201ENST00000602529 1483 ntBASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 RNF165-205ENST00000588679 2904 ntBASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 AL022326.1-202ENST00000641533 845 ntBASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 SIGLEC16-201ENST00000599858 1437 ntBASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3RF3Q8TEJ3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 AC148477.5-201ENST00000625164 1645 ntBASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 POLD2P1-201ENST00000511220 997 ntBASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 AC104109.2-201ENST00000602919 1418 ntBASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3RF3Q8TEJ3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 AC105339.3-201ENST00000560043 636 ntBASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.08■□□□□ 0.97
SH3RF3Q8TEJ3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms