Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 KRT18P48-201ENST00000434763 852 ntBASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP1Q8TDR0 AC100803.2-201ENST00000562459 1963 ntBASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 AC073508.3-201ENST00000619697 1419 ntBASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRAF3IP1Q8TDR0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 RNF152P1-201ENST00000397754 604 ntBASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 AC092647.4-201ENST00000457211 535 ntBASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP1Q8TDR0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP1Q8TDR0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms