Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NUP43Q8NFH3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 AC009949.1-201ENST00000623048 1830 ntBASIC16.71■□□□□ 0.27
NUP43Q8NFH3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 SPDYE13P-201ENST00000445314 798 ntBASIC16.71■□□□□ 0.27
NUP43Q8NFH3 AC112698.1-201ENST00000510299 916 ntBASIC16.71■□□□□ 0.27
NUP43Q8NFH3 KRT18P21-201ENST00000515767 1272 ntBASIC16.71■□□□□ 0.27
NUP43Q8NFH3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 KRT8P47-201ENST00000604727 1398 ntBASIC16.71■□□□□ 0.27
NUP43Q8NFH3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NUP43Q8NFH3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NUP43Q8NFH3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NUP43Q8NFH3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NUP43Q8NFH3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 AL355312.1-201ENST00000407115 2176 ntBASIC16.7■□□□□ 0.26
NUP43Q8NFH3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.7■□□□□ 0.26
NUP43Q8NFH3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 RNF126P1-202ENST00000569893 925 ntBASIC16.7■□□□□ 0.26
NUP43Q8NFH3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 AL390719.2-201ENST00000606993 987 ntBASIC16.7■□□□□ 0.26
NUP43Q8NFH3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.7■□□□□ 0.26
NUP43Q8NFH3 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.7■□□□□ 0.26
NUP43Q8NFH3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms