Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 BX276092.5-203ENST00000456199 560 ntBASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 AC116407.4-201ENST00000623319 1061 ntBASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRFBP1Q8NEF9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 MIR1224-201ENST00000408193 85 ntBASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 PCED1CP-201ENST00000419887 785 ntBASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SRFBP1Q8NEF9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 GNAS-203ENST00000306120 1878 ntBASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 AC010331.1-201ENST00000611423 582 ntBASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 IGHV3-41-201ENST00000613121 348 ntBASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRFBP1Q8NEF9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 IER3-202ENST00000376377 1350 ntBASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SRFBP1Q8NEF9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms