Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 MIR5100-201ENST00000579544 119 ntBASIC20.21■□□□□ 0.83
RETREG2Q8NC44 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 AL671883.3-201ENST00000603274 991 ntBASIC20.21■□□□□ 0.83
RETREG2Q8NC44 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 TP73-AS1-207ENST00000624167 988 ntBASIC20.21■□□□□ 0.83
RETREG2Q8NC44 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 MIR574-201ENST00000385209 96 ntBASIC20.2■□□□□ 0.82
RETREG2Q8NC44 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RETREG2Q8NC44 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 AC099343.3-201ENST00000605834 2503 ntBASIC20.19■□□□□ 0.82
RETREG2Q8NC44 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 AC067852.2-201ENST00000590513 2313 ntBASIC20.19■□□□□ 0.82
RETREG2Q8NC44 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 KRT18P13-201ENST00000400056 1290 ntBASIC20.19■□□□□ 0.82
RETREG2Q8NC44 AL031284.1-201ENST00000419297 478 ntBASIC20.19■□□□□ 0.82
RETREG2Q8NC44 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.19■□□□□ 0.82
RETREG2Q8NC44 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.19■□□□□ 0.82
RETREG2Q8NC44 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.18■□□□□ 0.82
RETREG2Q8NC44 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 KRT18P67-201ENST00000432816 1264 ntBASIC20.18■□□□□ 0.82
RETREG2Q8NC44 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 AC138028.4-201ENST00000564984 1845 ntBASIC20.18■□□□□ 0.82
RETREG2Q8NC44 AL024508.2-201ENST00000607749 1894 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms