Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNPOQ8N3V7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 KRT18P27-201ENST00000427733 1299 ntBASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 AC134684.3-201ENST00000641758 218 ntBASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SYNPOQ8N3V7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 AC120498.9-201ENST00000339021 3867 ntBASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 SIGLEC16-201ENST00000599858 1437 ntBASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 AC099343.3-201ENST00000605834 2503 ntBASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SYNPOQ8N3V7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 AL355385.1-201ENST00000606123 409 ntBASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.08■□□□□ 0.48
SYNPOQ8N3V7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 RPS8P6-201ENST00000426177 609 ntBASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 AC007967.2-201ENST00000432613 625 ntBASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 HMGN1P19-201ENST00000436976 333 ntBASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms