Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
VPS8Q8N3P4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC27.76■■■□□ 2.04
VPS8Q8N3P4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
VPS8Q8N3P4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC27.76■■■□□ 2.04
VPS8Q8N3P4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC27.76■■■□□ 2.04
VPS8Q8N3P4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC27.76■■■□□ 2.04
VPS8Q8N3P4 BX005266.1-201ENST00000473402 457 ntBASIC27.76■■■□□ 2.04
VPS8Q8N3P4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC27.76■■■□□ 2.04
VPS8Q8N3P4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.04
VPS8Q8N3P4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC27.76■■■□□ 2.04
VPS8Q8N3P4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC27.76■■■□□ 2.03
VPS8Q8N3P4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 MOK-208ENST00000519058 917 ntTSL 2 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 AC243591.1-201ENST00000452967 1364 ntBASIC27.75■■■□□ 2.03
VPS8Q8N3P4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 AF186996.4-201ENST00000467186 377 ntBASIC27.75■■■□□ 2.03
VPS8Q8N3P4 PENK-208ENST00000523051 772 ntTSL 5 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC27.75■■■□□ 2.03
VPS8Q8N3P4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC27.75■■■□□ 2.03
VPS8Q8N3P4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 AC009336.1-201ENST00000608941 1553 ntBASIC27.74■■■□□ 2.03
VPS8Q8N3P4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 AP001005.1-201ENST00000571755 1248 ntBASIC27.74■■■□□ 2.03
VPS8Q8N3P4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS8Q8N3P4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 AL031284.1-201ENST00000419297 478 ntBASIC27.73■■■□□ 2.03
VPS8Q8N3P4 RNPS1P1-201ENST00000507437 918 ntBASIC27.73■■■□□ 2.03
VPS8Q8N3P4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms