Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 UNC93B2-201ENST00000285383 730 ntBASIC12□□□□□ -0.49
LINC01561Q8N1V8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 HIST1H2APS4-201ENST00000362070 348 ntBASIC12□□□□□ -0.49
LINC01561Q8N1V8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 CD99P1-205ENST00000527459 561 ntBASIC12□□□□□ -0.49
LINC01561Q8N1V8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 AC113410.3-201ENST00000623366 203 ntBASIC12□□□□□ -0.49
LINC01561Q8N1V8 AL049637.2-201ENST00000641778 930 ntBASIC12□□□□□ -0.49
LINC01561Q8N1V8 AC092865.7-201ENST00000641832 219 ntBASIC12□□□□□ -0.49
LINC01561Q8N1V8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 AL596257.1-201ENST00000641463 2694 ntBASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 PVRIG2P-201ENST00000435460 978 ntBASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 KRT18P65-201ENST00000439811 1286 ntBASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 AC026471.5-201ENST00000615068 467 ntBASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 ITM2C-210ENST00000620962 501 ntBASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
LINC01561Q8N1V8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms