Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 Z83836.1-201ENST00000624605 1642 ntBASIC17.26■□□□□ 0.35
KRT78Q8N1N4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 SPDYE13P-201ENST00000445314 798 ntBASIC17.26■□□□□ 0.35
KRT78Q8N1N4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 AL136038.3-201ENST00000561909 1096 ntBASIC17.26■□□□□ 0.35
KRT78Q8N1N4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 NTF6B-201ENST00000591913 560 ntBASIC17.26■□□□□ 0.35
KRT78Q8N1N4 AL390719.2-201ENST00000606993 987 ntBASIC17.26■□□□□ 0.35
KRT78Q8N1N4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 AL121956.5-201ENST00000625261 221 ntBASIC17.26■□□□□ 0.35
KRT78Q8N1N4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 AL133373.2-201ENST00000623187 2828 ntBASIC17.26■□□□□ 0.35
KRT78Q8N1N4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT78Q8N1N4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT78Q8N1N4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 RNF126P1-202ENST00000569893 925 ntBASIC17.24■□□□□ 0.35
KRT78Q8N1N4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT78Q8N1N4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT78Q8N1N4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms