Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 AC112777.1-201ENST00000540175 1423 ntBASIC19.35■□□□□ 0.69
VPS52Q8N1B4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 ANO7L1-203ENST00000602586 1720 ntBASIC19.35■□□□□ 0.69
VPS52Q8N1B4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 AC093909.1-201ENST00000504731 1122 ntBASIC19.35■□□□□ 0.69
VPS52Q8N1B4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 AC117500.6-201ENST00000624871 588 ntBASIC19.35■□□□□ 0.69
VPS52Q8N1B4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 AC009113.1-201ENST00000570267 2443 ntBASIC19.35■□□□□ 0.69
VPS52Q8N1B4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS52Q8N1B4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 RNPS1P1-201ENST00000507437 918 ntBASIC19.34■□□□□ 0.69
VPS52Q8N1B4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 AL355877.3-201ENST00000622820 899 ntBASIC19.34■□□□□ 0.69
VPS52Q8N1B4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VPS52Q8N1B4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VPS52Q8N1B4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VPS52Q8N1B4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS52Q8N1B4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.33■□□□□ 0.68
VPS52Q8N1B4 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.33■□□□□ 0.68
VPS52Q8N1B4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.33■□□□□ 0.68
VPS52Q8N1B4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.33■□□□□ 0.68
VPS52Q8N1B4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS52Q8N1B4 MTDHP3-201ENST00000594186 672 ntBASIC19.33■□□□□ 0.68
VPS52Q8N1B4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS52Q8N1B4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.33■□□□□ 0.68
VPS52Q8N1B4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
VPS52Q8N1B4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms