Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CCDC65Q8IXS2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 AC005332.1-201ENST00000577698 1310 ntBASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 AC087388.1-201ENST00000571370 1112 ntBASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC65Q8IXS2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 DDX43P3-201ENST00000441064 443 ntBASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 FAM86EP-206ENST00000510506 987 ntBASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC65Q8IXS2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 KRT8P26-201ENST00000534154 1276 ntBASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC65Q8IXS2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 LINC00896-202ENST00000609602 2128 ntBASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC65Q8IXS2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms