Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 KRT8P47-201ENST00000604727 1398 ntBASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 AC009949.1-201ENST00000623048 1830 ntBASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 AC020916.1-201ENST00000587762 1774 ntBASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 IGHGP-201ENST00000390555 1178 ntBASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 LINC01023-201ENST00000606054 436 ntBASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKL3Q8IVW4 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 MIR662-201ENST00000384847 95 ntBASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 AC211429.1-201ENST00000415277 523 ntBASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 AK4P3-201ENST00000418260 669 ntBASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 KRT18P38-201ENST00000449496 1282 ntBASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 AC006011.2-201ENST00000621313 1158 ntBASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 LINC00304-203ENST00000565008 1864 ntBASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKL3Q8IVW4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.33■□□□□ 0.53
CDKL3Q8IVW4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms