Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 SIGLEC16-201ENST00000599858 1437 ntBASIC19.25■□□□□ 0.67
HERC6Q8IVU3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 CRYGEP-201ENST00000412192 528 ntBASIC19.24■□□□□ 0.67
HERC6Q8IVU3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 FAM8A3P-201ENST00000427218 844 ntBASIC19.24■□□□□ 0.67
HERC6Q8IVU3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 AP002472.1-201ENST00000577490 586 ntBASIC19.24■□□□□ 0.67
HERC6Q8IVU3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 AC092364.2-202ENST00000597012 1073 ntBASIC19.24■□□□□ 0.67
HERC6Q8IVU3 AD001527.2-201ENST00000622994 785 ntBASIC19.24■□□□□ 0.67
HERC6Q8IVU3 AL049812.1-201ENST00000432563 2267 ntBASIC19.24■□□□□ 0.67
HERC6Q8IVU3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HERC6Q8IVU3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 SPDYE21P-201ENST00000413323 827 ntBASIC19.23■□□□□ 0.67
HERC6Q8IVU3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 AL589182.2-201ENST00000619332 1049 ntBASIC19.23■□□□□ 0.67
HERC6Q8IVU3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERC6Q8IVU3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms