Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK2Q86Y07 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK2Q86Y07 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VRK2Q86Y07 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK2Q86Y07 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK2Q86Y07 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 AC211429.1-201ENST00000415277 523 ntBASIC16.52■□□□□ 0.24
VRK2Q86Y07 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 KRT18P65-201ENST00000439811 1286 ntBASIC16.52■□□□□ 0.24
VRK2Q86Y07 KRT18P38-201ENST00000449496 1282 ntBASIC16.52■□□□□ 0.24
VRK2Q86Y07 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
VRK2Q86Y07 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK2Q86Y07 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VRK2Q86Y07 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VRK2Q86Y07 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VRK2Q86Y07 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VRK2Q86Y07 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VRK2Q86Y07 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VRK2Q86Y07 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VRK2Q86Y07 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VRK2Q86Y07 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VRK2Q86Y07 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
VRK2Q86Y07 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VRK2Q86Y07 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 KRT8P47-201ENST00000604727 1398 ntBASIC16.51■□□□□ 0.23
VRK2Q86Y07 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 AC108860.2-201ENST00000562760 2183 ntBASIC16.51■□□□□ 0.23
VRK2Q86Y07 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VRK2Q86Y07 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VRK2Q86Y07 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 AC012313.1-201ENST00000593393 3059 ntBASIC16.5■□□□□ 0.23
VRK2Q86Y07 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 FAM8A6P-201ENST00000407496 1135 ntBASIC16.5■□□□□ 0.23
VRK2Q86Y07 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms