Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AC108725.1-201ENST00000495472 409 ntBASIC9.64□□□□□ -0.87
UBR4Q5T4S7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 RN7SL589P-201ENST00000481268 310 ntBASIC9.64□□□□□ -0.87
UBR4Q5T4S7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AGER-214ENST00000538695 487 ntTSL 2 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 EIF5AP2-201ENST00000585668 1047 ntBASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AC091271.1-201ENST00000611877 1162 ntBASIC9.64□□□□□ -0.87
UBR4Q5T4S7 MIR6080-201ENST00000617359 66 ntBASIC9.64□□□□□ -0.87
UBR4Q5T4S7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 NCF1C-201ENST00000438382 1427 ntBASIC9.64□□□□□ -0.87
UBR4Q5T4S7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBR4Q5T4S7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AL805961.1-202ENST00000641562 540 ntBASIC9.63□□□□□ -0.87
UBR4Q5T4S7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AP003419.4-201ENST00000616071 517 ntBASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AD001527.2-201ENST00000622994 785 ntBASIC9.63□□□□□ -0.87
UBR4Q5T4S7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AL627389.1-201ENST00000413508 1182 ntBASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AC099336.1-201ENST00000417053 1171 ntBASIC9.63□□□□□ -0.87
UBR4Q5T4S7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 ACTG1P17-201ENST00000558391 1119 ntBASIC9.63□□□□□ -0.87
UBR4Q5T4S7 CD7-202ENST00000578509 925 ntTSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UBR4Q5T4S7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBR4Q5T4S7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC9.62□□□□□ -0.87
UBR4Q5T4S7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBR4Q5T4S7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBR4Q5T4S7 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBR4Q5T4S7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms