Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP221Q4G0U5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP221Q4G0U5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP221Q4G0U5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP221Q4G0U5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP221Q4G0U5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 MIR149-201ENST00000384879 89 ntBASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 BX276092.5-203ENST00000456199 560 ntBASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 KRT8P26-201ENST00000534154 1276 ntBASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 NPAP1P7-201ENST00000613027 823 ntBASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 KRT89P-201ENST00000620027 1478 ntBASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP221Q4G0U5 AC016734.2-201ENST00000624325 1377 ntBASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 TSSC2-201ENST00000450217 709 ntBASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 RNF126P1-202ENST00000569893 925 ntBASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CFAP221Q4G0U5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 AC024563.2-201ENST00000603282 481 ntBASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CFAP221Q4G0U5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.42■□□□□ 0.7
CFAP221Q4G0U5 AC009102.3-201ENST00000623118 1491 ntBASIC19.42■□□□□ 0.7
CFAP221Q4G0U5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP221Q4G0U5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CFAP221Q4G0U5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP221Q4G0U5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP221Q4G0U5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP221Q4G0U5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms