Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SKP1P63208 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SKP1P63208 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SKP1P63208 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SKP1P63208 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.96■□□□□ 0.3
SKP1P63208 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SKP1P63208 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SKP1P63208 KRT18P55-202ENST00000578578 1546 ntBASIC16.96■□□□□ 0.3
SKP1P63208 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SKP1P63208 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.96■□□□□ 0.3
SKP1P63208 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SKP1P63208 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.95■□□□□ 0.3
SKP1P63208 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.95■□□□□ 0.3
SKP1P63208 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
SKP1P63208 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SKP1P63208 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SKP1P63208 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.95■□□□□ 0.3
SKP1P63208 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 SLC25A6P5-201ENST00000435663 894 ntBASIC16.95■□□□□ 0.3
SKP1P63208 KRT17P6-201ENST00000453795 1220 ntBASIC16.95■□□□□ 0.3
SKP1P63208 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 AC009533.2-201ENST00000543664 586 ntBASIC16.95■□□□□ 0.3
SKP1P63208 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.95■□□□□ 0.3
SKP1P63208 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.95■□□□□ 0.3
SKP1P63208 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SKP1P63208 MIR3180-1-201ENST00000580374 94 ntBASIC16.95■□□□□ 0.3
SKP1P63208 MIR3180-3-201ENST00000584616 94 ntBASIC16.95■□□□□ 0.3
SKP1P63208 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.95■□□□□ 0.3
SKP1P63208 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.95■□□□□ 0.3
SKP1P63208 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.95■□□□□ 0.3
SKP1P63208 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.95■□□□□ 0.3
SKP1P63208 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SKP1P63208 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.95■□□□□ 0.3
SKP1P63208 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.94■□□□□ 0.3
SKP1P63208 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.94■□□□□ 0.3
SKP1P63208 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.94■□□□□ 0.3
SKP1P63208 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SKP1P63208 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.94■□□□□ 0.3
SKP1P63208 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SKP1P63208 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SKP1P63208 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SKP1P63208 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SKP1P63208 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.94■□□□□ 0.3
SKP1P63208 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.94■□□□□ 0.3
SKP1P63208 AC074051.2-201ENST00000565115 352 ntBASIC16.94■□□□□ 0.3
SKP1P63208 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.94■□□□□ 0.3
SKP1P63208 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.94■□□□□ 0.3
SKP1P63208 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.94■□□□□ 0.3
SKP1P63208 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SKP1P63208 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SKP1P63208 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SKP1P63208 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SKP1P63208 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.94■□□□□ 0.3
SKP1P63208 AC097374.2-201ENST00000618617 1306 ntBASIC16.94■□□□□ 0.3
SKP1P63208 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SKP1P63208 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SKP1P63208 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.93■□□□□ 0.3
SKP1P63208 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SKP1P63208 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SKP1P63208 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SKP1P63208 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.93■□□□□ 0.3
SKP1P63208 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SKP1P63208 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms