Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SNRPEP62304 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.69□□□□□ -0.22
SNRPEP62304 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SNRPEP62304 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
SNRPEP62304 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNRPEP62304 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNRPEP62304 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNRPEP62304 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.69□□□□□ -0.22
SNRPEP62304 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNRPEP62304 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNRPEP62304 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNRPEP62304 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SNRPEP62304 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC13.69□□□□□ -0.22
SNRPEP62304 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.69□□□□□ -0.22
SNRPEP62304 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNRPEP62304 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNRPEP62304 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNRPEP62304 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SNRPEP62304 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.68□□□□□ -0.22
SNRPEP62304 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.68□□□□□ -0.22
SNRPEP62304 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SNRPEP62304 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.68□□□□□ -0.22
SNRPEP62304 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 AC073347.1-201ENST00000421633 2643 ntBASIC13.68□□□□□ -0.22
SNRPEP62304 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.68□□□□□ -0.22
SNRPEP62304 AC067930.6-201ENST00000623257 4947 ntBASIC13.68□□□□□ -0.22
SNRPEP62304 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 GPX1-201ENST00000419349 1106 ntBASIC13.68□□□□□ -0.22
SNRPEP62304 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.68□□□□□ -0.22
SNRPEP62304 AP005435.1-201ENST00000529293 1178 ntBASIC13.68□□□□□ -0.22
SNRPEP62304 AC008175.2-201ENST00000612840 297 ntBASIC13.68□□□□□ -0.22
SNRPEP62304 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
SNRPEP62304 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.68□□□□□ -0.22
SNRPEP62304 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.68□□□□□ -0.22
SNRPEP62304 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SNRPEP62304 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNRPEP62304 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SNRPEP62304 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SNRPEP62304 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.67□□□□□ -0.22
SNRPEP62304 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SNRPEP62304 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SNRPEP62304 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SNRPEP62304 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.67□□□□□ -0.22
SNRPEP62304 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 HEIH-201ENST00000623091 1652 ntBASIC13.67□□□□□ -0.22
SNRPEP62304 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SNRPEP62304 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SNRPEP62304 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.67□□□□□ -0.22
SNRPEP62304 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC13.67□□□□□ -0.22
SNRPEP62304 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SNRPEP62304 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.67□□□□□ -0.22
SNRPEP62304 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
SNRPEP62304 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SNRPEP62304 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.67□□□□□ -0.22
SNRPEP62304 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.67□□□□□ -0.22
SNRPEP62304 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SNRPEP62304 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
SNRPEP62304 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNRPEP62304 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.66□□□□□ -0.22
SNRPEP62304 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SNRPEP62304 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms