Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
RIPK4P57078 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
RIPK4P57078 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC23.34■■□□□ 1.33
RIPK4P57078 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 AKR1C7P-201ENST00000305623 895 ntBASIC23.34■■□□□ 1.33
RIPK4P57078 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.34■■□□□ 1.33
RIPK4P57078 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.34■■□□□ 1.33
RIPK4P57078 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC23.34■■□□□ 1.33
RIPK4P57078 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC23.34■■□□□ 1.33
RIPK4P57078 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
RIPK4P57078 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.34■■□□□ 1.33
RIPK4P57078 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RIPK4P57078 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC23.34■■□□□ 1.33
RIPK4P57078 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
RIPK4P57078 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
RIPK4P57078 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC23.34■■□□□ 1.33
RIPK4P57078 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RIPK4P57078 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
RIPK4P57078 NOC2LP1-202ENST00000452600 2235 ntBASIC23.33■■□□□ 1.33
RIPK4P57078 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC23.33■■□□□ 1.33
RIPK4P57078 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
RIPK4P57078 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC23.33■■□□□ 1.33
RIPK4P57078 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 COX5BP2-201ENST00000392354 334 ntBASIC23.33■■□□□ 1.33
RIPK4P57078 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.33■■□□□ 1.33
RIPK4P57078 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RIPK4P57078 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
RIPK4P57078 AC116407.2-201ENST00000613639 860 ntBASIC23.33■■□□□ 1.33
RIPK4P57078 AL691432.3-201ENST00000621860 400 ntBASIC23.33■■□□□ 1.33
RIPK4P57078 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.33■■□□□ 1.33
RIPK4P57078 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
RIPK4P57078 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.33■■□□□ 1.32
RIPK4P57078 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RIPK4P57078 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.33■■□□□ 1.32
RIPK4P57078 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RIPK4P57078 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
RIPK4P57078 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.33■■□□□ 1.32
RIPK4P57078 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.33■■□□□ 1.32
RIPK4P57078 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RIPK4P57078 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC23.33■■□□□ 1.32
RIPK4P57078 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC23.32■■□□□ 1.32
RIPK4P57078 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RIPK4P57078 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 MED16-201ENST00000269814 1199 ntTSL 5 BASIC23.32■■□□□ 1.32
RIPK4P57078 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.32■■□□□ 1.32
RIPK4P57078 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.32■■□□□ 1.32
RIPK4P57078 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
RIPK4P57078 FAM220CP-201ENST00000395253 831 ntBASIC23.32■■□□□ 1.32
RIPK4P57078 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
RIPK4P57078 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.32■■□□□ 1.32
RIPK4P57078 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.32■■□□□ 1.32
RIPK4P57078 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.32■■□□□ 1.32
RIPK4P57078 LINC01711-201ENST00000598340 967 ntBASIC23.32■■□□□ 1.32
RIPK4P57078 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.32■■□□□ 1.32
RIPK4P57078 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC23.32■■□□□ 1.32
RIPK4P57078 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
RIPK4P57078 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.32■■□□□ 1.32
RIPK4P57078 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC23.32■■□□□ 1.32
RIPK4P57078 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC23.32■■□□□ 1.32
RIPK4P57078 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RIPK4P57078 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RIPK4P57078 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
RIPK4P57078 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
RIPK4P57078 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.31■■□□□ 1.32
RIPK4P57078 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RIPK4P57078 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RIPK4P57078 FUOM-202ENST00000368551 628 ntTSL 3 BASIC23.31■■□□□ 1.32
RIPK4P57078 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC23.31■■□□□ 1.32
RIPK4P57078 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.31■■□□□ 1.32
RIPK4P57078 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.31■■□□□ 1.32
RIPK4P57078 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms