Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 AC132938.6-201ENST00000623828 1655 ntBASIC15.54■□□□□ 0.08
CLDN12P56749 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLDN12P56749 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN12P56749 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CLDN12P56749 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN12P56749 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLDN12P56749 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDN12P56749 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN12P56749 C1QBPP2-201ENST00000528754 825 ntBASIC15.54■□□□□ 0.08
CLDN12P56749 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLDN12P56749 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CLDN12P56749 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLDN12P56749 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDN12P56749 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN12P56749 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLDN12P56749 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLDN12P56749 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CLDN12P56749 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLDN12P56749 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN12P56749 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN12P56749 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN12P56749 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN12P56749 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
CLDN12P56749 HOXB1-202ENST00000577092 1414 ntBASIC15.53■□□□□ 0.08
CLDN12P56749 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN12P56749 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLDN12P56749 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN12P56749 LINC00304-203ENST00000565008 1864 ntBASIC15.53■□□□□ 0.08
CLDN12P56749 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN12P56749 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 MIR935-201ENST00000401179 91 ntBASIC15.53■□□□□ 0.08
CLDN12P56749 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.53■□□□□ 0.08
CLDN12P56749 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN12P56749 HLA-L-209ENST00000420110 1011 ntBASIC15.53■□□□□ 0.08
CLDN12P56749 FAM197Y1-201ENST00000421178 764 ntBASIC15.53■□□□□ 0.08
CLDN12P56749 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN12P56749 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN12P56749 AC006058.3-201ENST00000606217 1069 ntBASIC15.53■□□□□ 0.08
CLDN12P56749 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.53■□□□□ 0.08
CLDN12P56749 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN12P56749 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
CLDN12P56749 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN12P56749 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN12P56749 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN12P56749 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLDN12P56749 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN12P56749 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN12P56749 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.52■□□□□ 0.08
CLDN12P56749 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN12P56749 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN12P56749 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLDN12P56749 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 PCDH8P1-201ENST00000428983 2773 ntBASIC15.52■□□□□ 0.08
CLDN12P56749 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN12P56749 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN12P56749 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms