Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN6P56747 TNXA-203ENST00000507684 2038 ntBASIC17.08■□□□□ 0.33
CLDN6P56747 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN6P56747 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN6P56747 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CLDN6P56747 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 AC132938.6-201ENST00000623828 1655 ntBASIC17.08■□□□□ 0.32
CLDN6P56747 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 AC010460.3-201ENST00000511359 1579 ntBASIC17.08■□□□□ 0.32
CLDN6P56747 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CLDN6P56747 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN6P56747 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN6P56747 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN6P56747 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CLDN6P56747 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN6P56747 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.08■□□□□ 0.32
CLDN6P56747 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN6P56747 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 AC005829.1-201ENST00000570002 483 ntBASIC17.08■□□□□ 0.32
CLDN6P56747 AL078644.1-201ENST00000609881 752 ntBASIC17.08■□□□□ 0.32
CLDN6P56747 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN6P56747 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN6P56747 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.08■□□□□ 0.32
CLDN6P56747 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
CLDN6P56747 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN6P56747 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN6P56747 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN6P56747 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.07■□□□□ 0.32
CLDN6P56747 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN6P56747 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLDN6P56747 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN6P56747 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN6P56747 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN6P56747 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN6P56747 AC106028.4-201ENST00000614509 607 ntBASIC17.07■□□□□ 0.32
CLDN6P56747 AL513190.1-201ENST00000621254 727 ntBASIC17.07■□□□□ 0.32
CLDN6P56747 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLDN6P56747 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN6P56747 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CLDN6P56747 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN6P56747 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLDN6P56747 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN6P56747 PMPCAP1-201ENST00000508114 1576 ntBASIC17.06■□□□□ 0.32
CLDN6P56747 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN6P56747 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLDN6P56747 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN6P56747 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLDN6P56747 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN6P56747 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CLDN6P56747 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CLDN6P56747 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.06■□□□□ 0.32
CLDN6P56747 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN6P56747 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN6P56747 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDN6P56747 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDN6P56747 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN6P56747 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN6P56747 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN6P56747 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CLDN6P56747 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN6P56747 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms