Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.04■□□□□ 0.48
WNT3AP56704 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
WNT3AP56704 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
WNT3AP56704 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.04■□□□□ 0.48
WNT3AP56704 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.04■□□□□ 0.48
WNT3AP56704 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.04■□□□□ 0.48
WNT3AP56704 AC090616.6-201ENST00000582640 721 ntBASIC18.04■□□□□ 0.48
WNT3AP56704 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.04■□□□□ 0.48
WNT3AP56704 AL592071.1-201ENST00000611956 408 ntBASIC18.04■□□□□ 0.48
WNT3AP56704 AC124864.1-201ENST00000623408 392 ntBASIC18.04■□□□□ 0.48
WNT3AP56704 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
WNT3AP56704 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.04■□□□□ 0.48
WNT3AP56704 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
WNT3AP56704 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.04■□□□□ 0.48
WNT3AP56704 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
WNT3AP56704 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
WNT3AP56704 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
WNT3AP56704 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.03■□□□□ 0.48
WNT3AP56704 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
WNT3AP56704 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.03■□□□□ 0.48
WNT3AP56704 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
WNT3AP56704 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 MIR1224-201ENST00000408193 85 ntBASIC18.03■□□□□ 0.48
WNT3AP56704 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
WNT3AP56704 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 DDX43P3-201ENST00000441064 443 ntBASIC18.03■□□□□ 0.48
WNT3AP56704 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
WNT3AP56704 BX276092.5-203ENST00000456199 560 ntBASIC18.03■□□□□ 0.48
WNT3AP56704 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.03■□□□□ 0.48
WNT3AP56704 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.03■□□□□ 0.48
WNT3AP56704 AL445228.2-201ENST00000605589 952 ntBASIC18.03■□□□□ 0.48
WNT3AP56704 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 AC010331.1-201ENST00000611423 582 ntBASIC18.03■□□□□ 0.48
WNT3AP56704 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
WNT3AP56704 IGHV3-41-201ENST00000613121 348 ntBASIC18.03■□□□□ 0.48
WNT3AP56704 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
WNT3AP56704 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
WNT3AP56704 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.02■□□□□ 0.48
WNT3AP56704 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
WNT3AP56704 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
WNT3AP56704 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
WNT3AP56704 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.02■□□□□ 0.48
WNT3AP56704 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.02■□□□□ 0.48
WNT3AP56704 AL355312.1-201ENST00000407115 2176 ntBASIC18.02■□□□□ 0.48
WNT3AP56704 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.02■□□□□ 0.48
WNT3AP56704 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.02■□□□□ 0.48
WNT3AP56704 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.02■□□□□ 0.48
WNT3AP56704 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
WNT3AP56704 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.02■□□□□ 0.48
WNT3AP56704 AL121672.3-201ENST00000608644 468 ntBASIC18.02■□□□□ 0.48
WNT3AP56704 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
WNT3AP56704 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.02■□□□□ 0.48
WNT3AP56704 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms