Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CMC4P56277 REXO1L9P-201ENST00000604264 2108 ntBASIC13.3□□□□□ -0.28
CMC4P56277 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CMC4P56277 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CMC4P56277 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.29□□□□□ -0.28
CMC4P56277 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CMC4P56277 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.29□□□□□ -0.28
CMC4P56277 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CMC4P56277 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CMC4P56277 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CMC4P56277 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.29□□□□□ -0.28
CMC4P56277 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.29□□□□□ -0.28
CMC4P56277 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.29□□□□□ -0.28
CMC4P56277 AC092119.3-201ENST00000612618 583 ntBASIC13.29□□□□□ -0.28
CMC4P56277 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.29□□□□□ -0.28
CMC4P56277 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 AC135050.7-201ENST00000624508 2218 ntBASIC13.29□□□□□ -0.28
CMC4P56277 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CMC4P56277 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.29□□□□□ -0.28
CMC4P56277 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.29□□□□□ -0.28
CMC4P56277 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CMC4P56277 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CMC4P56277 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.28□□□□□ -0.28
CMC4P56277 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.28□□□□□ -0.28
CMC4P56277 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.28□□□□□ -0.28
CMC4P56277 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 AC099343.3-201ENST00000605834 2503 ntBASIC13.28□□□□□ -0.28
CMC4P56277 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 FAM220CP-201ENST00000395253 831 ntBASIC13.28□□□□□ -0.28
CMC4P56277 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.28□□□□□ -0.28
CMC4P56277 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.28□□□□□ -0.28
CMC4P56277 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.28□□□□□ -0.28
CMC4P56277 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.28□□□□□ -0.28
CMC4P56277 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 MIR3180-1-201ENST00000580374 94 ntBASIC13.28□□□□□ -0.28
CMC4P56277 MIR3180-3-201ENST00000584616 94 ntBASIC13.28□□□□□ -0.28
CMC4P56277 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.28□□□□□ -0.28
CMC4P56277 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.28□□□□□ -0.28
CMC4P56277 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.28□□□□□ -0.28
CMC4P56277 AC125634.1-201ENST00000438758 1403 ntBASIC13.28□□□□□ -0.28
CMC4P56277 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms