Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH11P55287 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH11P55287 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CDH11P55287 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH11P55287 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDH11P55287 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
CDH11P55287 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH11P55287 MIR149-201ENST00000384879 89 ntBASIC16.38■□□□□ 0.21
CDH11P55287 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDH11P55287 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH11P55287 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.38■□□□□ 0.21
CDH11P55287 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH11P55287 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH11P55287 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH11P55287 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH11P55287 AC093010.1-201ENST00000473625 1624 ntBASIC16.37■□□□□ 0.21
CDH11P55287 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH11P55287 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH11P55287 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDH11P55287 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH11P55287 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH11P55287 AL163051.1-201ENST00000569214 1512 ntBASIC16.37■□□□□ 0.21
CDH11P55287 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH11P55287 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH11P55287 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH11P55287 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDH11P55287 AC140113.3-201ENST00000605663 199 ntBASIC16.37■□□□□ 0.21
CDH11P55287 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH11P55287 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH11P55287 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CDH11P55287 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH11P55287 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH11P55287 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH11P55287 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH11P55287 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH11P55287 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH11P55287 AP000523.1-201ENST00000398242 1049 ntBASIC16.36■□□□□ 0.21
CDH11P55287 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CDH11P55287 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH11P55287 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 TSPY5P-201ENST00000426936 936 ntBASIC16.36■□□□□ 0.21
CDH11P55287 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.36■□□□□ 0.21
CDH11P55287 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH11P55287 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.36■□□□□ 0.21
CDH11P55287 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CDH11P55287 AL023973.1-201ENST00000624619 620 ntBASIC16.36■□□□□ 0.21
CDH11P55287 AL031432.5-201ENST00000641059 760 ntBASIC16.36■□□□□ 0.21
CDH11P55287 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDH11P55287 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDH11P55287 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH11P55287 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms