Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.15■□□□□ 0.34
EPHA4P54764 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
EPHA4P54764 COX5BP2-201ENST00000392354 334 ntBASIC17.15■□□□□ 0.34
EPHA4P54764 AP000347.1-202ENST00000435868 847 ntBASIC17.15■□□□□ 0.34
EPHA4P54764 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.15■□□□□ 0.34
EPHA4P54764 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.15■□□□□ 0.34
EPHA4P54764 AC148477.8-201ENST00000624298 468 ntBASIC17.15■□□□□ 0.34
EPHA4P54764 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.15■□□□□ 0.34
EPHA4P54764 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EPHA4P54764 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
EPHA4P54764 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EPHA4P54764 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
EPHA4P54764 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA4P54764 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
EPHA4P54764 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
EPHA4P54764 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
EPHA4P54764 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
EPHA4P54764 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
EPHA4P54764 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.14■□□□□ 0.33
EPHA4P54764 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.14■□□□□ 0.33
EPHA4P54764 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.14■□□□□ 0.33
EPHA4P54764 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.14■□□□□ 0.33
EPHA4P54764 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
EPHA4P54764 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.14■□□□□ 0.33
EPHA4P54764 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.14■□□□□ 0.33
EPHA4P54764 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.14■□□□□ 0.33
EPHA4P54764 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.14■□□□□ 0.33
EPHA4P54764 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.14■□□□□ 0.33
EPHA4P54764 SART3-203ENST00000546611 1184 ntBASIC17.14■□□□□ 0.33
EPHA4P54764 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
EPHA4P54764 AC021087.4-201ENST00000563761 564 ntBASIC17.14■□□□□ 0.33
EPHA4P54764 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.14■□□□□ 0.33
EPHA4P54764 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.14■□□□□ 0.33
EPHA4P54764 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.14■□□□□ 0.33
EPHA4P54764 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.14■□□□□ 0.33
EPHA4P54764 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.14■□□□□ 0.33
EPHA4P54764 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
EPHA4P54764 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
EPHA4P54764 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.14■□□□□ 0.33
EPHA4P54764 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
EPHA4P54764 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.14■□□□□ 0.33
EPHA4P54764 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
EPHA4P54764 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA4P54764 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
EPHA4P54764 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.13■□□□□ 0.33
EPHA4P54764 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.13■□□□□ 0.33
EPHA4P54764 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
EPHA4P54764 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EPHA4P54764 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.13■□□□□ 0.33
EPHA4P54764 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.13■□□□□ 0.33
EPHA4P54764 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
EPHA4P54764 AD001527.2-201ENST00000622994 785 ntBASIC17.13■□□□□ 0.33
EPHA4P54764 FAM215A-202ENST00000632077 792 ntBASIC17.13■□□□□ 0.33
EPHA4P54764 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EPHA4P54764 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.13■□□□□ 0.33
EPHA4P54764 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EPHA4P54764 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms