Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.73■□□□□ 0.43
NUBP1P53384 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NUBP1P53384 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.73■□□□□ 0.43
NUBP1P53384 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.72■□□□□ 0.43
NUBP1P53384 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.72■□□□□ 0.43
NUBP1P53384 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NUBP1P53384 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.72■□□□□ 0.43
NUBP1P53384 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.72■□□□□ 0.43
NUBP1P53384 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.72■□□□□ 0.43
NUBP1P53384 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.72■□□□□ 0.43
NUBP1P53384 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC17.72■□□□□ 0.43
NUBP1P53384 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.72■□□□□ 0.43
NUBP1P53384 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.72■□□□□ 0.43
NUBP1P53384 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.72■□□□□ 0.43
NUBP1P53384 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC17.72■□□□□ 0.43
NUBP1P53384 AC097478.2-201ENST00000610572 514 ntBASIC17.72■□□□□ 0.43
NUBP1P53384 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.72■□□□□ 0.43
NUBP1P53384 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC17.72■□□□□ 0.43
NUBP1P53384 AC006927.4-201ENST00000639187 543 ntBASIC17.72■□□□□ 0.43
NUBP1P53384 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUBP1P53384 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.72■□□□□ 0.43
NUBP1P53384 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.72■□□□□ 0.43
NUBP1P53384 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NUBP1P53384 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.71■□□□□ 0.43
NUBP1P53384 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.71■□□□□ 0.43
NUBP1P53384 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NUBP1P53384 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.71■□□□□ 0.43
NUBP1P53384 CRB3P1-201ENST00000449338 276 ntBASIC17.71■□□□□ 0.43
NUBP1P53384 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.71■□□□□ 0.43
NUBP1P53384 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NUBP1P53384 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC17.71■□□□□ 0.43
NUBP1P53384 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.71■□□□□ 0.43
NUBP1P53384 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.71■□□□□ 0.43
NUBP1P53384 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NUBP1P53384 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NUBP1P53384 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUBP1P53384 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.71■□□□□ 0.43
NUBP1P53384 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.71■□□□□ 0.43
NUBP1P53384 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.71■□□□□ 0.42
NUBP1P53384 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NUBP1P53384 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NUBP1P53384 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.7■□□□□ 0.42
NUBP1P53384 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
NUBP1P53384 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NUBP1P53384 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUBP1P53384 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUBP1P53384 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUBP1P53384 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NUBP1P53384 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUBP1P53384 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.7■□□□□ 0.42
NUBP1P53384 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC17.7■□□□□ 0.42
NUBP1P53384 AC069335.1-201ENST00000489972 472 ntBASIC17.7■□□□□ 0.42
NUBP1P53384 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.7■□□□□ 0.42
NUBP1P53384 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.7■□□□□ 0.42
NUBP1P53384 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC17.7■□□□□ 0.42
NUBP1P53384 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.7■□□□□ 0.42
NUBP1P53384 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.7■□□□□ 0.42
NUBP1P53384 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.7■□□□□ 0.42
NUBP1P53384 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC17.7■□□□□ 0.42
NUBP1P53384 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.7■□□□□ 0.42
NUBP1P53384 AC004777.1-201ENST00000624317 287 ntBASIC17.7■□□□□ 0.42
NUBP1P53384 AC026310.3-201ENST00000625186 2373 ntBASIC17.7■□□□□ 0.42
NUBP1P53384 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUBP1P53384 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUBP1P53384 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUBP1P53384 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NUBP1P53384 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUBP1P53384 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.7■□□□□ 0.42
NUBP1P53384 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NUBP1P53384 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.7■□□□□ 0.42
NUBP1P53384 AC073314.1-201ENST00000568729 2216 ntBASIC17.7■□□□□ 0.42
NUBP1P53384 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NUBP1P53384 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms