Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 LINC00602-201ENST00000629776 2065 ntBASIC17.32■□□□□ 0.36
CLCN2P51788 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN2P51788 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CLCN2P51788 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCN2P51788 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN2P51788 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN2P51788 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN2P51788 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.32■□□□□ 0.36
CLCN2P51788 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN2P51788 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN2P51788 AL359075.1-203ENST00000462729 1002 ntBASIC17.32■□□□□ 0.36
CLCN2P51788 AC034232.1-201ENST00000506026 1064 ntBASIC17.32■□□□□ 0.36
CLCN2P51788 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLCN2P51788 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCN2P51788 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCN2P51788 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLCN2P51788 AC024243.1-201ENST00000609234 778 ntBASIC17.32■□□□□ 0.36
CLCN2P51788 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.32■□□□□ 0.36
CLCN2P51788 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN2P51788 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN2P51788 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN2P51788 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLCN2P51788 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN2P51788 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN2P51788 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN2P51788 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN2P51788 AC034236.2-201ENST00000606662 1610 ntBASIC17.32■□□□□ 0.36
CLCN2P51788 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN2P51788 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLCN2P51788 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN2P51788 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLCN2P51788 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN2P51788 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN2P51788 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 STARP1-201ENST00000397973 869 ntBASIC17.31■□□□□ 0.36
CLCN2P51788 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN2P51788 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN2P51788 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN2P51788 KRT18P23-201ENST00000435622 1283 ntBASIC17.31■□□□□ 0.36
CLCN2P51788 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN2P51788 KRT18P41-201ENST00000518924 1277 ntBASIC17.31■□□□□ 0.36
CLCN2P51788 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLCN2P51788 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CLCN2P51788 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CLCN2P51788 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN2P51788 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCN2P51788 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCN2P51788 MYLKP1-201ENST00000509077 1580 ntBASIC17.31■□□□□ 0.36
CLCN2P51788 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLCN2P51788 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLCN2P51788 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN2P51788 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 HOXB1-202ENST00000577092 1414 ntBASIC17.3■□□□□ 0.36
CLCN2P51788 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN2P51788 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLCN2P51788 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CLCN2P51788 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN2P51788 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN2P51788 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN2P51788 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN2P51788 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CLCN2P51788 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCN2P51788 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCN2P51788 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN2P51788 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLCN2P51788 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms