Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1DP48730 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1DP48730 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CSNK1DP48730 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CSNK1DP48730 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CSNK1DP48730 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.87■□□□□ 0.45
CSNK1DP48730 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.87■□□□□ 0.45
CSNK1DP48730 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CSNK1DP48730 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.87■□□□□ 0.45
CSNK1DP48730 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.87■□□□□ 0.45
CSNK1DP48730 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.87■□□□□ 0.45
CSNK1DP48730 REXO1L6P-202ENST00000619970 1078 ntBASIC17.87■□□□□ 0.45
CSNK1DP48730 AL691432.3-201ENST00000621860 400 ntBASIC17.87■□□□□ 0.45
CSNK1DP48730 AD001527.2-201ENST00000622994 785 ntBASIC17.87■□□□□ 0.45
CSNK1DP48730 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CSNK1DP48730 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1DP48730 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CSNK1DP48730 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CSNK1DP48730 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1DP48730 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1DP48730 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.86■□□□□ 0.45
CSNK1DP48730 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CSNK1DP48730 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.86■□□□□ 0.45
CSNK1DP48730 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.86■□□□□ 0.45
CSNK1DP48730 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.86■□□□□ 0.45
CSNK1DP48730 AC002558.1-201ENST00000488906 803 ntBASIC17.86■□□□□ 0.45
CSNK1DP48730 AC106795.1-205ENST00000512851 1056 ntBASIC17.86■□□□□ 0.45
CSNK1DP48730 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.86■□□□□ 0.45
CSNK1DP48730 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.86■□□□□ 0.45
CSNK1DP48730 AC019129.2-201ENST00000609837 1235 ntBASIC17.86■□□□□ 0.45
CSNK1DP48730 LINC01451-201ENST00000623792 534 ntBASIC17.86■□□□□ 0.45
CSNK1DP48730 AP000867.4-201ENST00000641616 219 ntBASIC17.86■□□□□ 0.45
CSNK1DP48730 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.86■□□□□ 0.45
CSNK1DP48730 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CSNK1DP48730 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.86■□□□□ 0.45
CSNK1DP48730 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CSNK1DP48730 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CSNK1DP48730 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1DP48730 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1DP48730 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1DP48730 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.85■□□□□ 0.45
CSNK1DP48730 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.85■□□□□ 0.45
CSNK1DP48730 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.85■□□□□ 0.45
CSNK1DP48730 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CSNK1DP48730 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSNK1DP48730 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1DP48730 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.85■□□□□ 0.45
CSNK1DP48730 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.85■□□□□ 0.45
CSNK1DP48730 RBM17P3-201ENST00000417687 1192 ntBASIC17.85■□□□□ 0.45
CSNK1DP48730 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CSNK1DP48730 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1DP48730 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1DP48730 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CSNK1DP48730 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1DP48730 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CSNK1DP48730 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.85■□□□□ 0.45
CSNK1DP48730 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.85■□□□□ 0.45
CSNK1DP48730 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSNK1DP48730 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1DP48730 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.85■□□□□ 0.45
CSNK1DP48730 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 AL353593.2-201ENST00000602529 1483 ntBASIC17.85■□□□□ 0.45
CSNK1DP48730 AL049757.1-201ENST00000616842 1596 ntBASIC17.85■□□□□ 0.45
CSNK1DP48730 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CSNK1DP48730 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1DP48730 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms