Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A2P43354 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A2P43354 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
NR4A2P43354 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
NR4A2P43354 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A2P43354 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.25■□□□□ 0.19
NR4A2P43354 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NR4A2P43354 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
NR4A2P43354 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A2P43354 MFAP1P1-201ENST00000442257 1255 ntBASIC16.25■□□□□ 0.19
NR4A2P43354 AC008040.2-201ENST00000461049 708 ntBASIC16.25■□□□□ 0.19
NR4A2P43354 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.25■□□□□ 0.19
NR4A2P43354 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A2P43354 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.25■□□□□ 0.19
NR4A2P43354 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NR4A2P43354 NTF6B-201ENST00000591913 560 ntBASIC16.25■□□□□ 0.19
NR4A2P43354 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NR4A2P43354 FAM87A-204ENST00000613235 858 ntBASIC16.25■□□□□ 0.19
NR4A2P43354 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.25■□□□□ 0.19
NR4A2P43354 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NR4A2P43354 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A2P43354 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A2P43354 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.25■□□□□ 0.19
NR4A2P43354 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NR4A2P43354 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.25■□□□□ 0.19
NR4A2P43354 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NR4A2P43354 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
NR4A2P43354 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 AC096733.2-201ENST00000609937 1394 ntBASIC16.25■□□□□ 0.19
NR4A2P43354 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
NR4A2P43354 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 PP12613-201ENST00000424958 2230 ntBASIC16.25■□□□□ 0.19
NR4A2P43354 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A2P43354 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A2P43354 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NR4A2P43354 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.24■□□□□ 0.19
NR4A2P43354 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.24■□□□□ 0.19
NR4A2P43354 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NR4A2P43354 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NR4A2P43354 AC138028.4-201ENST00000564984 1845 ntBASIC16.24■□□□□ 0.19
NR4A2P43354 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NR4A2P43354 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.24■□□□□ 0.19
NR4A2P43354 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.24■□□□□ 0.19
NR4A2P43354 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
NR4A2P43354 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.24■□□□□ 0.19
NR4A2P43354 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.24■□□□□ 0.19
NR4A2P43354 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.24■□□□□ 0.19
NR4A2P43354 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NR4A2P43354 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.24■□□□□ 0.19
NR4A2P43354 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 CCR12P-201ENST00000446203 998 ntBASIC16.24■□□□□ 0.19
NR4A2P43354 AC116562.4-202ENST00000641738 218 ntBASIC16.24■□□□□ 0.19
NR4A2P43354 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.24■□□□□ 0.19
NR4A2P43354 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.24■□□□□ 0.19
NR4A2P43354 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A2P43354 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
NR4A2P43354 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.24■□□□□ 0.19
NR4A2P43354 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.23■□□□□ 0.19
NR4A2P43354 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR4A2P43354 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.23■□□□□ 0.19
NR4A2P43354 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NR4A2P43354 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms