Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 AC113347.1-201ENST00000413321 391 ntBASIC18.69■□□□□ 0.58
SLC1A1P43005 TSPY12P-201ENST00000421279 868 ntBASIC18.69■□□□□ 0.58
SLC1A1P43005 SPDYE15P-201ENST00000424157 909 ntBASIC18.69■□□□□ 0.58
SLC1A1P43005 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC1A1P43005 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SLC1A1P43005 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 AC012306.2-201ENST00000609350 630 ntBASIC18.69■□□□□ 0.58
SLC1A1P43005 AC011558.1-201ENST00000623459 338 ntBASIC18.69■□□□□ 0.58
SLC1A1P43005 AC097493.4-201ENST00000641197 219 ntBASIC18.69■□□□□ 0.58
SLC1A1P43005 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC1A1P43005 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC1A1P43005 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC1A1P43005 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SLC1A1P43005 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A1P43005 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC1A1P43005 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
SLC1A1P43005 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC1A1P43005 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A1P43005 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A1P43005 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC1A1P43005 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC1A1P43005 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SLC1A1P43005 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A1P43005 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A1P43005 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC1A1P43005 AL137013.1-201ENST00000432946 1228 ntBASIC18.68■□□□□ 0.58
SLC1A1P43005 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC1A1P43005 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.68■□□□□ 0.58
SLC1A1P43005 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC1A1P43005 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC1A1P43005 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC1A1P43005 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.68■□□□□ 0.58
SLC1A1P43005 AC005363.2-201ENST00000618631 242 ntBASIC18.68■□□□□ 0.58
SLC1A1P43005 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC1A1P43005 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC1A1P43005 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SLC1A1P43005 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A1P43005 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A1P43005 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC1A1P43005 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A1P43005 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC1A1P43005 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC1A1P43005 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 AC112698.1-201ENST00000510299 916 ntBASIC18.67■□□□□ 0.58
SLC1A1P43005 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC1A1P43005 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC1A1P43005 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC1A1P43005 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SLC1A1P43005 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SLC1A1P43005 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC1A1P43005 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC1A1P43005 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SLC1A1P43005 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLC1A1P43005 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC1A1P43005 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC1A1P43005 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC1A1P43005 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC1A1P43005 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC1A1P43005 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC1A1P43005 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC1A1P43005 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SLC1A1P43005 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC1A1P43005 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC1A1P43005 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC1A1P43005 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC1A1P43005 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC1A1P43005 AC133561.5-201ENST00000635547 218 ntBASIC18.66■□□□□ 0.58
SLC1A1P43005 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.66■□□□□ 0.58
SLC1A1P43005 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms